9M7D
Crystal structure of AsDMS D333N mutant
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-17A |
Synchrotron site | Photon Factory |
Beamline | BL-17A |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-02-19 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.000000 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 97.032, 97.032, 405.183 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.182 - 2.300 |
R-factor | 0.185786985739 |
Rwork | 0.184 |
R-free | 0.22628 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | AlphaFold |
RMSD bond length | 0.013 |
RMSD bond angle | 1.242 |
Data reduction software | XDS (VERSION Jan 10, 2022 BUILT=20220120) |
Data scaling software | XDS (VERSION Jan 10, 2022 BUILT=20220120) |
Phasing software | PHASER (2.8.3) |
Refinement software | REFMAC (5.8.0403) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.182 | 2.382 |
High resolution limit [Å] | 2.300 | 2.300 |
Number of reflections | 87319 | 8539 |
<I/σ(I)> | 15.12 | 1.61 |
Completeness [%] | 100.0 | 100 |
Redundancy | 13.2 | 13.9 |
CC(1/2) | 0.999 | 0.627 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 1.72 M ammonium sulfate, 0.095 M MES-NaOH pH6.5, 0.005 M MES-NaOH pH7.0 |