Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9L9X

Structure of SPARTA in complex with guide DNA and a 20nt target DNA

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL10U2
Synchrotron siteSSRF
BeamlineBL10U2
Temperature [K]100
Detector technologyPIXEL
Collection date2024-12-16
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.97918
Spacegroup nameP 32 2 1
Unit cell lengths140.420, 140.420, 176.710
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution19.500 - 6.700
R-factor0.2505
Rwork0.247
R-free0.31900
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.016
RMSD bond angle1.525
Data reduction softwareHKL-3000 (7.21)
Data scaling softwareHKL-3000 (7.21)
Phasing softwarePHENIX (1.17.1_3660)
Refinement softwarePHENIX (1.17.1_3660)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]29.2706.880
High resolution limit [Å]6.7006.700
Rpim0.0480.900
Number of reflections3669277
<I/σ(I)>13.7
Completeness [%]98.8100
Redundancy17.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2910.1 M BICINE, pH=8.5, 4.6% PEG4000

238895

PDB entries from 2025-07-16

PDB statisticsPDBj update infoContact PDBjnumon