9L49
Crystal structure of HLA-C*12:03-RV9
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NFPSS BEAMLINE BL18U |
Synchrotron site | NFPSS |
Beamline | BL18U |
Temperature [K] | 95 |
Detector technology | CCD |
Collection date | 2023-05-01 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9785 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 85.309, 95.270, 119.190 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.650 - 3.000 |
R-factor | 0.2067 |
Rwork | 0.203 |
R-free | 0.23490 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.002 |
RMSD bond angle | 0.529 |
Data reduction software | MOSFLM |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.630 | 3.180 |
High resolution limit [Å] | 3.000 | 3.000 |
Rmerge | 0.182 | 0.466 |
Rmeas | 0.198 | 0.506 |
Rpim | 0.078 | 0.195 |
Number of reflections | 10021 | 1593 |
<I/σ(I)> | 12.9 | |
Completeness [%] | 99.8 | 100 |
Redundancy | 11.6 | 12.5 |
CC(1/2) | 0.993 | 0.963 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 277.15 | 1.5 M Ammonium sulfate 0.1 M Sodium HEPES pH7.5 2% v/v PEG400 |