9L48
Crystal structure of HLA-C*12:02-RV9
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRF BEAMLINE BL18U1 |
| Synchrotron site | SSRF |
| Beamline | BL18U1 |
| Temperature [K] | 95 |
| Detector technology | CCD |
| Collection date | 2023-05-01 |
| Detector | ADSC QUANTUM 315r |
| Wavelength(s) | 0.97849 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 52.170, 71.860, 124.850 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 48.140 - 1.900 |
| R-factor | 0.1762 |
| Rwork | 0.175 |
| R-free | 0.20430 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.006 |
| RMSD bond angle | 0.815 |
| Data reduction software | MOSFLM |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 48.140 | 1.940 |
| High resolution limit [Å] | 1.900 | 1.900 |
| Rmerge | 0.106 | 0.477 |
| Rmeas | 0.116 | 0.522 |
| Rpim | 0.046 | 0.209 |
| Number of reflections | 37484 | 2355 |
| <I/σ(I)> | 14.8 | |
| Completeness [%] | 99.2 | 98.3 |
| Redundancy | 11 | 10.7 |
| CC(1/2) | 0.999 | 0.925 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 277.15 | 0.2 M sodium citrate tribasic dihydrate, 20% w/v Polyethylene glycol 3,350 |






