9KN2
Crystallization of zinc metalloproteinase PepO from Porphyromonas gingivalis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL18U1 |
Synchrotron site | SSRF |
Beamline | BL18U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2024-04-04 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97915 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 121.190, 121.190, 199.018 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 31.840 - 2.040 |
R-factor | 0.1652 |
Rwork | 0.164 |
R-free | 0.19010 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.010 |
RMSD bond angle | 0.990 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MLPHARE |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 31.840 | 2.120 |
High resolution limit [Å] | 2.040 | 2.040 |
Rmerge | 0.128 | 0.836 |
Number of reflections | 92725 | 8111 |
<I/σ(I)> | 14.2 | 5.6 |
Completeness [%] | 98.4 | 87.24 |
Redundancy | 20.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 287.15 | 2.4 M ammonium sulfate, 0.1 M HEPES pH 7.0 |