9KHA
Crystal structure of maltodextrin-binding protein SPs0871 from Streptococcus pyogenes at 2.20 A
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-5A |
Synchrotron site | Photon Factory |
Beamline | BL-5A |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-03-17 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 1.0000 |
Spacegroup name | H 3 2 |
Unit cell lengths | 118.189, 118.189, 353.944 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 45.300 - 2.200 |
Rwork | 0.185 |
R-free | 0.22370 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.005 |
RMSD bond angle | 1.462 |
Data reduction software | MOSFLM (7.2.2) |
Data scaling software | SCALA (3.3.22) |
Phasing software | MOLREP (11.7.02) |
Refinement software | REFMAC (5.8.0425) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.300 | 2.320 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.084 | 0.352 |
Rpim | 0.020 | 0.098 |
Number of reflections | 47995 | 6775 |
<I/σ(I)> | 21.9 | 6.8 |
Completeness [%] | 98.4 | 89.4 |
Redundancy | 17.3 | 13.4 |
CC(1/2) | 0.999 | 0.985 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 293.13 | Ammonium citrate tribasic 1.8 M |