9K2K
Structure of ClpP from Staphylococcus aureus in complex with ZY7
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-06-06 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.988 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 96.368, 174.507, 194.455 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 129.880 - 2.740 |
R-factor | 0.22678 |
Rwork | 0.226 |
R-free | 0.24868 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.011 |
RMSD bond angle | 1.644 |
Data reduction software | autoPROC |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 129.880 | 30.000 | 2.850 |
High resolution limit [Å] | 2.740 | 5.910 | 2.750 |
Rmerge | 0.079 | 0.056 | 0.273 |
Rmeas | 0.088 | 0.061 | 0.336 |
Rpim | 0.039 | 0.024 | 0.190 |
Number of reflections | 62269 | 6551 | 5356 |
<I/σ(I)> | 11.8 | ||
Completeness [%] | 92.4 | 98.4 | 82.2 |
Redundancy | 4 | 5.8 | 2.4 |
CC(1/2) | 0.993 | 0.998 | 0.566 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 289 | 0.1 M Sodium chloride, 0.1 M BICINE pH9.0, 20% PEG monomethyl ether 550 |