9K2C
Structure of ClpP from Staphylococcus aureus in complex with ZY1
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-10-12 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.988 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 94.696, 126.010, 145.797 |
Unit cell angles | 90.00, 93.91, 90.00 |
Refinement procedure
Resolution | 29.900 - 1.980 |
R-factor | 0.20647 |
Rwork | 0.205 |
R-free | 0.22708 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.003 |
RMSD bond angle | 0.934 |
Data reduction software | autoPROC |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0415) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.000 | 30.000 | 2.050 |
High resolution limit [Å] | 1.980 | 4.260 | 1.980 |
Rmerge | 0.093 | 0.073 | 0.302 |
Rmeas | 0.106 | 0.083 | 0.359 |
Rpim | 0.050 | 0.038 | 0.191 |
Total number of observations | 856784 | ||
Number of reflections | 230193 | 23366 | 22697 |
<I/σ(I)> | 10.6 | ||
Completeness [%] | 97.3 | 97.5 | 96.3 |
Redundancy | 3.7 | 4.6 | 3 |
CC(1/2) | 0.986 | 0.985 | 0.814 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 289 | 0.2 M Calcium chloride dihydrate, 0.1 M Sodium acetate trihydate pH4.6, 30% MPD |