9K2A
Structure of ClpP from Staphylococcus aureus in complex with ZY27
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-11-28 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.987 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 94.416, 190.263, 96.201 |
Unit cell angles | 90.00, 117.82, 90.00 |
Refinement procedure
Resolution | 95.130 - 2.190 |
R-factor | 0.21551 |
Rwork | 0.214 |
R-free | 0.24437 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 1.260 |
Data reduction software | autoPROC |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 95.130 | 30.000 | 2.280 |
High resolution limit [Å] | 2.190 | 4.730 | 2.200 |
Rmerge | 0.086 | 0.051 | 0.290 |
Rmeas | 0.097 | 0.057 | 0.342 |
Rpim | 0.044 | 0.024 | 0.178 |
Number of reflections | 149067 | 15295 | 14541 |
<I/σ(I)> | 7.4 | ||
Completeness [%] | 97.9 | 99.5 | 95.8 |
Redundancy | 4.2 | 5.6 | 3.1 |
CC(1/2) | 0.991 | 0.996 | 0.801 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 289 | 0.01 M Iron chloride hexahydate, 0.1 M Sodium citrate tribasic dihydrate, pH 5.6,10% Jeffamine |