9JQL
The C-terminal structure of N6-methyladenosine deaminase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-11-11 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.54056 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 103.169, 103.169, 42.629 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 23.760 - 2.100 |
R-factor | 0.2065 |
Rwork | 0.206 |
R-free | 0.21030 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.003 |
RMSD bond angle | 0.609 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.21.1_5286) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 23.760 | 2.210 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmerge | 0.118 | 0.682 |
Rmeas | 0.124 | |
Number of reflections | 13926 | 13964 |
<I/σ(I)> | 18.2 | 3.9 |
Completeness [%] | 99.9 | 100 |
Redundancy | 10.4 | 10.8 |
CC(1/2) | 0.999 | 0.887 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 277 | 1.5 M KH2PO4 and 0.1 M HEPES (pH7.0) |