9JA4
artificial dinuclear Zn-bound metalloprotein 2 (D2:Zn)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 7A (6B, 6C1) |
Synchrotron site | PAL/PLS |
Beamline | 7A (6B, 6C1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2024-04-17 |
Detector | DECTRIS EIGER2 S 9M |
Wavelength(s) | 0.979330 |
Spacegroup name | P 1 |
Unit cell lengths | 52.494, 63.822, 73.524 |
Unit cell angles | 89.95, 89.81, 66.28 |
Refinement procedure
Resolution | 29.240 - 2.700 |
R-factor | 0.27655 |
Rwork | 0.275 |
R-free | 0.29872 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.005 |
RMSD bond angle | 1.223 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0430) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.000 | 30.000 | 2.860 |
High resolution limit [Å] | 2.700 | 7.820 | 2.700 |
Rmerge | 0.072 | 0.045 | 0.282 |
Rmeas | 0.101 | 0.063 | 0.399 |
Number of reflections | 23345 | 234 | 1206 |
<I/σ(I)> | 6.59 | ||
Completeness [%] | 97.1 | ||
Redundancy | 3.45 | ||
CC(1/2) | 0.988 | 0.985 | 0.811 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 293 | 0.2 M Li2SO4, 0.1M MOPS, pH8.0 buffer, and 20 % PEG 4000 |