Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9J3U

Crystal structure of tyrosine phenol-lyase in complex with 3,5-dihydroxybenzoic acid

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPHOTON FACTORY BEAMLINE BL-17A
Synchrotron sitePhoton Factory
BeamlineBL-17A
Temperature [K]100
Detector technologyPIXEL
Collection date2023-12-23
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.980000
Spacegroup nameP 21 21 2
Unit cell lengths111.422, 155.664, 58.919
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution38.940 - 1.830
R-factor0.1519
Rwork0.151
R-free0.18210
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2ez1
RMSD bond length0.007
RMSD bond angle0.995
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]38.9401.895
High resolution limit [Å]1.8301.830
Number of reflections905468483
<I/σ(I)>15.95
Completeness [%]99.3
Redundancy6.4
CC(1/2)0.9990.802
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2933,5DHBA, HEPES-KOH pH 7.5, succinic acid, DMSO

238895

PDB entries from 2025-07-16

PDB statisticsPDBj update infoContact PDBjnumon