Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL10U2 |
Synchrotron site | SSRF |
Beamline | BL10U2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2024-06-08 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.979 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 117.380, 113.720, 83.710 |
Unit cell angles | 90.00, 127.27, 90.00 |
Refinement procedure
Resolution | 28.760 - 2.480 |
R-factor | 0.18949 |
Rwork | 0.188 |
R-free | 0.22756 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4p9w |
RMSD bond length | 0.010 |
RMSD bond angle | 1.851 |
Data reduction software | xia2 |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 28.760 | 2.540 |
High resolution limit [Å] | 2.480 | 2.480 |
Rmerge | 0.062 | 0.547 |
Rmeas | 0.068 | 0.631 |
Rpim | 0.027 | 0.306 |
Total number of observations | 9200 | |
Number of reflections | 30883 | 2220 |
<I/σ(I)> | 18 | 3.1 |
Completeness [%] | 99.6 | |
Redundancy | 5.8 | 4.1 |
CC(1/2) | 0.998 | 0.636 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 298 | buffer: 20 mM HEPES, 5 mM CaCl2, 5 mM MnCl2; pH = 7.2, precipitant: Ammonium phosphate |