Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9IXH

Apg mutant enzyme D448A of the human gut flora K. grimontii TD1 acarbose hydrolase

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL19U1
Synchrotron siteSSRF
BeamlineBL19U1
Temperature [K]100
Detector technologyPIXEL
Collection date2024-03-22
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.98655
Spacegroup nameP 65 2 2
Unit cell lengths75.797, 75.797, 405.549
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution20.000 - 2.430
R-factor0.218
Rwork0.217
R-free0.24350
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7vt9
RMSD bond length0.002
RMSD bond angle0.566
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHENIX
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0002.430
High resolution limit [Å]2.4302.430
Rmerge0.1070.107
Number of reflections274213026
<I/σ(I)>13.62.3
Completeness [%]99.8100
Redundancy8.28.6
CC(1/2)0.9980.791
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.5289.150.7 M Sodium citrate tribasic dihydrate 0.1M Tris, PH=8.5

239803

PDB entries from 2025-08-06

PDB statisticsPDBj update infoContact PDBjnumon