9IX2
Crystal structure of the mouse RIP3 kinase domain in complexed with TAK-632
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL02U1 |
Synchrotron site | SSRF |
Beamline | BL02U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-11-29 |
Detector | DECTRIS EIGER2 S 9M |
Wavelength(s) | 0.9791 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 146.771, 54.870, 102.724 |
Unit cell angles | 90.00, 130.78, 90.00 |
Refinement procedure
Resolution | 38.890 - 2.390 |
R-factor | 0.23 |
Rwork | 0.228 |
R-free | 0.27610 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4m66 |
RMSD bond length | 0.005 |
RMSD bond angle | 0.931 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.17.1_3660: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 77.790 | 2.520 |
High resolution limit [Å] | 2.390 | 2.390 |
Rmerge | 0.088 | 0.634 |
Rmeas | 0.102 | 0.730 |
Rpim | 0.051 | 0.358 |
Total number of observations | 94731 | 14175 |
Number of reflections | 24180 | 3470 |
<I/σ(I)> | 9.9 | 2.4 |
Completeness [%] | 98.3 | |
Redundancy | 3.9 | 4.1 |
CC(1/2) | 0.995 | 0.823 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 18-22% w/v PEG3350, 10-15 mM L-proline |