Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9ISP

DUF2436 domain which is frequently found in virulence proteins from Porphyromonas gingivalis

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPAL/PLS BEAMLINE 7A (6B, 6C1)
Synchrotron sitePAL/PLS
Beamline7A (6B, 6C1)
Temperature [K]100
Detector technologyPIXEL
Collection date2023-12-26
DetectorDECTRIS EIGER2 S 9M
Wavelength(s)0.979
Spacegroup nameP 32 2 1
Unit cell lengths101.275, 101.275, 70.168
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution29.240 - 2.210
R-factor0.2388
Rwork0.238
R-free0.25860
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.010
RMSD bond angle1.250
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwareMOLREP
Refinement softwarePHENIX (1.18.2_3874)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]29.2402.289
High resolution limit [Å]2.2102.210
Number of reflections211912066
<I/σ(I)>22.29
Completeness [%]99.9
Redundancy19.8
CC(1/2)0.9870.483
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP72930.2 M Sodium Chloride, 0.1 M Tris-HCl (pH 7), 1 M sodium Citrate

238895

PDB entries from 2025-07-16

PDB statisticsPDBj update infoContact PDBjnumon