9ISP
DUF2436 domain which is frequently found in virulence proteins from Porphyromonas gingivalis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 7A (6B, 6C1) |
Synchrotron site | PAL/PLS |
Beamline | 7A (6B, 6C1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-12-26 |
Detector | DECTRIS EIGER2 S 9M |
Wavelength(s) | 0.979 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 101.275, 101.275, 70.168 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 29.240 - 2.210 |
R-factor | 0.2388 |
Rwork | 0.238 |
R-free | 0.25860 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.010 |
RMSD bond angle | 1.250 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | MOLREP |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 29.240 | 2.289 |
High resolution limit [Å] | 2.210 | 2.210 |
Number of reflections | 21191 | 2066 |
<I/σ(I)> | 22.29 | |
Completeness [%] | 99.9 | |
Redundancy | 19.8 | |
CC(1/2) | 0.987 | 0.483 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 293 | 0.2 M Sodium Chloride, 0.1 M Tris-HCl (pH 7), 1 M sodium Citrate |