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9INV

Crystal structure of DAPK1 in complex with isoliquiritigenin

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPHOTON FACTORY BEAMLINE BL-17A
Synchrotron sitePhoton Factory
BeamlineBL-17A
Temperature [K]100
Detector technologyPIXEL
Collection date2024-02-24
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.98
Spacegroup nameP 21 21 21
Unit cell lengths46.623, 62.279, 88.654
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution37.320 - 1.610
R-factor0.1742
Rwork0.173
R-free0.20500
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.016
RMSD bond angle1.482
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHENIX
Refinement softwarePHENIX ((1.21_5207: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]46.6201.640
High resolution limit [Å]1.6101.610
Rmeas0.0641.006
Rpim0.0240.379
Number of reflections341971652
<I/σ(I)>20.12.2
Completeness [%]100.0
Redundancy7.3
CC(1/2)0.9990.740
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP293PEG 400, ammonium sulfate, MES pH 6.5

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PDB entries from 2024-11-13

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