9IMU
The complex of rice immune receptor RGA5-HMA8 with rice blast effector protein AVR-PikD
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2024-04-21 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9792 |
Spacegroup name | P 61 |
Unit cell lengths | 66.410, 66.410, 84.446 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 34.040 - 2.380 |
R-factor | 0.1998 |
Rwork | 0.196 |
R-free | 0.23780 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5a6w |
RMSD bond length | 0.009 |
RMSD bond angle | 1.299 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.18.2_3874: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.420 |
High resolution limit [Å] | 2.380 | 2.380 |
Number of reflections | 8536 | 410 |
<I/σ(I)> | 45.2 | |
Completeness [%] | 99.8 | |
Redundancy | 19.3 | |
CC(1/2) | 0.986 | 0.951 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 300 | 0.1 M Succinic acid pH 7.0, 15% w/v Polyethylene glycol 3,350 |