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9IK0

Crystal structure of PrfaH encoded by IncX3 plasmids

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL02U1
Synchrotron siteSSRF
BeamlineBL02U1
Temperature [K]100
Detector technologyPIXEL
Collection date2023-06-05
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.97856
Spacegroup nameP 43
Unit cell lengths57.695, 57.695, 116.465
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution32.210 - 2.000
R-factor0.1808
Rwork0.179
R-free0.21420
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)AlphaFold
RMSD bond length0.002
RMSD bond angle0.534
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]32.2102.072
High resolution limit [Å]2.0002.000
Rmerge0.0640.593
Number of reflections250862361
<I/σ(I)>23.4
Completeness [%]97.692.66
Redundancy9.8
CC(1/2)0.9990.903
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP4.82910.1 M Sodium citrate tribasic dihydrate pH 4.8, 15-18% w/v PEG20,000

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