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9ICV

DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX + 2'-DEOXYADENOSINE-5'-TRIPHOSPHATE, SOAKED IN THE PRESENCE OF DATP AND ZNCL2

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RU200
Temperature [K]298
Detector technologyAREA DETECTOR
Collection date1995-05-01
DetectorSDMS
Spacegroup nameP 21 21 2
Unit cell lengths179.972, 57.628, 48.334
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution20.000 - 2.700
R-factor0.178
Structure solution methodDIFFERENCE FOURIER
Starting model (for MR)8icb
RMSD bond length0.019
RMSD bond angle18.900

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Data reduction softwareSDMS
Data scaling softwareSDMS
Phasing softwareTNT (V. 5-D)
Refinement softwareTNT (5-D)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0002.800
High resolution limit [Å]2.7002.700
Rmerge0.037

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0.139

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Number of reflections13088
Completeness [%]90.070
Redundancy1.81.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, sitting drop

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6.5THIS ENTRY DESCRIBES THE STRUCTURE THAT RESULTED WHEN A COCRYSTAL OF HUMAN DNA POLYMERASE BETA COMPLEXED WITH 7 BASE PAIRS OF DNA (SEE ENTRY 9ICJ AND REFERENCE 1) HAD BEEN SOAKED IN THE FOLLOWING SOLUTION FOR 24 HOURS: PEG 3350, 16% MES, 100 MILLIMOLAR, PH 6.5 NACL, 150 MILLIMOLAR DATP, 0.1 MILLIMOLAR ZNCL2, 0.2 MILLIMOLAR SEE REFERENCE 2 FOR DETAILS CONCERNING EXPERIMENTAL PROCEDURES, RESULTS, AND DISCUSSION FOR THIS STRUCTURE.
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11reservoirPEG335010-12 (%(w/v))
21reservoirMES0.1 (M)
31reservoir0.1 (M)

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PDB entries from 2024-11-06

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