9IB9

Tumor necrosis factor-like lectin PLTL from Photorhabdus laumondii in complex with B Lewis b pentasaccharide

Experimental procedure

Experimental method	SINGLE WAVELENGTH
Source type	SYNCHROTRON
Source details	PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1)
Synchrotron site	PETRA III, EMBL c/o DESY
Beamline	P13 (MX1)
Temperature [K]	100
Detector technology	PIXEL
Collection date	2023-12-04
Detector	DECTRIS EIGER X 16M
Wavelength(s)	0.97630
Spacegroup name	P 1 21 1
Unit cell lengths	50.303, 166.979, 50.346
Unit cell angles	90.00, 106.63, 90.00

Refinement procedure

Resolution	46.388 - 1.300
Rwork	0.142
R-free	0.17310
Structure solution method	MOLECULAR REPLACEMENT
RMSD bond length	0.010
RMSD bond angle	1.697
Data reduction software	autoPROC
Data scaling software	SCALA
Phasing software	PHASER (2.8.3)
Refinement software	REFMAC (5.8.0425)

Data quality characteristics

	Overall	Outer shell
Low resolution limit [Å]	48.240	1.370
High resolution limit [Å]	1.300	1.300
Number of reflections	186694	26429
<I/σ(I)>	12.6	2
Completeness [%]	96.2
Redundancy	7.1
CC(1/2)	0.990	0.693

Crystallization Conditions

crystal ID	method	pH	temperature	details
1	VAPOR DIFFUSION, SITTING DROP	5.9	293.15	trisodium citrate, PEG1500