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9I55

Mouse phosphomannomutase 2 in complex with the activator glucose-1,6-bisphosphate

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALBA BEAMLINE XALOC
Synchrotron siteALBA
BeamlineXALOC
Temperature [K]100
Detector technologyPIXEL
Collection date2022-04-22
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.97926
Spacegroup nameP 21 21 21
Unit cell lengths81.285, 99.138, 213.470
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution64.670 - 2.750
R-factor0.2084
Rwork0.205
R-free0.26470
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.005
RMSD bond angle0.685
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]213.4702.850
High resolution limit [Å]2.7502.750
Rpim0.0970.883
Number of reflections452734408
<I/σ(I)>6.61
Completeness [%]98.0100
Redundancy6.66.6
CC(1/2)0.9930.558
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION291Drops of 2 ul of protein and 2 mM glucose-1,6-bisphosphate (Sigma) and 2 ul of reservoir solution. Best crystals appeared after 2-7 days in 0.1 M Tris-HCl pH 8.5, 0.2 M MgCl2, 20-22% PEG 8000. Crystals were cryo-protected by briefly soaking in mother liquor with increasing concentrations of PEG up to 30% and 5% glycerol.

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PDB entries from 2026-02-11

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