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9HY1

sc-4E (scFv derived from the mAb 4E1 against CD93) crystallized at pH 7.5 (dimeric state from gel filtration)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04
Synchrotron siteDiamond
BeamlineI04
Temperature [K]100
Detector technologyPIXEL
Collection date2024-10-10
DetectorDECTRIS EIGER2 XE 16M
Wavelength(s)0.95374
Spacegroup nameP 32 2 1
Unit cell lengths64.369, 64.369, 159.880
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution55.750 - 1.810
R-factor0.17047
Rwork0.169
R-free0.19633
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.013
RMSD bond angle2.159
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0425)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]79.9401.850
High resolution limit [Å]1.8101.810
Rmerge0.0471.755
Rmeas0.0481.802
Rpim0.0110.407
Number of reflections359522092
<I/σ(I)>282
Completeness [%]100.0100
Redundancy20.219.4
CC(1/2)1.0000.716
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.52933.8 M NaCl, 0.1 M HEPES pH 7.5

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PDB entries from 2026-01-28

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