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9HRK

Cytochrome P460 from Methyloccocus capsulatus in the ferrous state (single crosslink from Lys)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I24
Synchrotron siteDiamond
BeamlineI24
Temperature [K]100
Detector technologyPIXEL
Collection date2024-04-24
DetectorDECTRIS EIGER X 9M
Wavelength(s)0.6199
Spacegroup nameP 21 21 21
Unit cell lengths46.380, 80.441, 84.780
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution58.340 - 1.330
R-factor0.1584
Rwork0.156
R-free0.19976
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.010
RMSD bond angle2.074
Data reduction softwareDIALS (3.18.1)
Data scaling softwareDIALS (3.18.1)
Phasing softwareREFMAC (5.8.0425)
Refinement softwareREFMAC (5.8.0430)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]58.3401.350
High resolution limit [Å]1.3301.330
Rmerge0.1222.112
Rmeas0.1332.407
Rpim0.0521.133
Total number of observations15083
Number of reflections735193594
<I/σ(I)>8.90.4
Completeness [%]100.0
Redundancy6.44.2
CC(1/2)0.9980.228
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP82932 uL of 7 mg/mL protein with 2 uL precipitant 1.9 M ammonium sulfate, 100 mM Tris-HCl pH 8.0 Cryoprotectant 1.0 M sodium malonate final, soak 100 mM sodium hydrosulfite final

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PDB entries from 2025-12-10

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