Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9HQQ

Variant Y432F of Orotidine 5'-monophosphate decarboxylase-domain of human UMPS in complex with the product UMP at 1.15 Angstrom resolution

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, EMBL c/o DESY BEAMLINE P14 (MX2)
Synchrotron sitePETRA III, EMBL c/o DESY
BeamlineP14 (MX2)
Temperature [K]100
Detector technologyPIXEL
Collection date2022-06-23
DetectorDECTRIS EIGER2 X CdTe 16M
Wavelength(s)0.6888
Spacegroup nameC 2 2 21
Unit cell lengths78.240, 116.630, 61.770
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution34.820 - 1.150
R-factor0.1313
Rwork0.130
R-free0.15050
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.009
RMSD bond angle1.132
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareMOLREP
Refinement softwarePHENIX ((1.20.1_4487: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]34.8201.191
High resolution limit [Å]1.1501.150
Rmeas0.068
Number of reflections1001219909
<I/σ(I)>18.68
Completeness [%]99.9
Redundancy13.2
CC(1/2)1.0000.534
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP293100 mM Tris/HCl pH 7.0, 1.7 - 1.9 M Ammonium sulfate, 10 mM Glutathion pH 8.0, 5% (w/v) Glycerol

258009

PDB entries from 2026-08-12

PDB statisticsPDBj update infoContact PDBjnumon