Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9HP4

Variant E311A of Orotidine 5'-monophosphate decarboxylase-domain of human UMPS in complex with the product UMP at 1.1 Angstrom resolution

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, EMBL c/o DESY BEAMLINE P14 (MX2)
Synchrotron sitePETRA III, EMBL c/o DESY
BeamlineP14 (MX2)
Temperature [K]100
Detector technologyPIXEL
Collection date2021-11-30
DetectorDECTRIS EIGER2 X CdTe 16M
Wavelength(s)0.6888
Spacegroup nameC 2 2 21
Unit cell lengths78.100, 116.440, 62.040
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution34.760 - 1.100
R-factor0.1288
Rwork0.128
R-free0.14680
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.009
RMSD bond angle1.109
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareMOLREP
Refinement softwarePHENIX ((1.20.1_4487: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]34.7601.139
High resolution limit [Å]1.1001.100
Rmeas0.074
Number of reflections1121259683
<I/σ(I)>17.76
Completeness [%]98.0
Redundancy12.8
CC(1/2)1.0000.583
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP293100 mM Tris/HCl pH 7.0, 1.7 - 1.9 M Ammonium sulfate, 10 mM Glutathion pH 8.0, 5% (w/v) Glycerol

255900

PDB entries from 2026-07-01

PDB statisticsPDBj update infoContact PDBjnumon