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9HOA

Variant D312A of Orotidine 5'-monophosphate decarboxylase-domain of human UMPS in complex with the substrate OMP at 1.2 Angstrom resolution

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, EMBL c/o DESY BEAMLINE P14 (MX2)
Synchrotron sitePETRA III, EMBL c/o DESY
BeamlineP14 (MX2)
Temperature [K]100
Detector technologyPIXEL
Collection date2024-02-29
DetectorDECTRIS EIGER2 X CdTe 16M
Wavelength(s)0.9763
Spacegroup nameC 2 2 21
Unit cell lengths76.730, 116.390, 62.150
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution44.610 - 1.200
R-factor0.1432
Rwork0.142
R-free0.17210
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.010
RMSD bond angle1.210
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareMOLREP
Refinement softwarePHENIX ((1.20.1_4487: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]44.6101.243
High resolution limit [Å]1.2001.200
Rmeas0.089
Number of reflections860608253
<I/σ(I)>12.8
Completeness [%]97.7
Redundancy11.9
CC(1/2)0.9990.764
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP293.15100 mM Tris/HCl pH 7.0, 1.7 - 1.9 M Ammonium sulfate, 10 mM Glutathion pH 8.0, 5% (w/v) Glycerol

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PDB entries from 2026-07-01

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