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9HO8

Variant D259A of Orotidine 5'-monophosphate decarboxylase-domain of human UMPS in complex with the product UMP

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, EMBL c/o DESY BEAMLINE P14 (MX2)
Synchrotron sitePETRA III, EMBL c/o DESY
BeamlineP14 (MX2)
Temperature [K]100
Detector technologyPIXEL
Collection date2024-04-19
DetectorDECTRIS EIGER2 X CdTe 16M
Wavelength(s)0.6888
Spacegroup nameP 1 21 1
Unit cell lengths70.160, 61.754, 71.507
Unit cell angles90.00, 113.98, 90.00
Refinement procedure
Resolution44.470 - 1.750
R-factor0.1799
Rwork0.178
R-free0.21540
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.011
RMSD bond angle1.112
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareMOLREP
Refinement softwarePHENIX ((1.20.1_4487: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]44.4701.814
High resolution limit [Å]1.7501.750
Rmeas0.072
Number of reflections512395549
<I/σ(I)>16.22
Completeness [%]90.9
Redundancy6.9
CC(1/2)0.9990.852
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP293.15100 mM Tris/HCl pH 7.0, 1.7 - 1.9 M Ammonium sulfate, 10 mM Glutathion pH 8.0, 5% (w/v) Glycerol

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