9HMQ
X-structure of the adduct formed upon reaction of the diiodido analogue of picoplatin with lysozyme (structure C)
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ELETTRA BEAMLINE 11.2C |
Synchrotron site | ELETTRA |
Beamline | 11.2C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-12-05 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.00 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 79.010, 79.010, 35.430 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 39.510 - 2.250 |
Rwork | 0.224 |
R-free | 0.27710 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 1.538 |
Data reduction software | autoPROC |
Data scaling software | autoPROC |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.510 | 2.280 |
High resolution limit [Å] | 2.250 | 2.250 |
Rmerge | 0.104 | 0.500 |
Rmeas | 0.108 | 0.516 |
Rpim | 0.026 | 0.123 |
Number of reflections | 5691 | 271 |
<I/σ(I)> | 19.4 | 9.6 |
Completeness [%] | 99.8 | 98 |
Redundancy | 18.2 | 9.6 |
CC(1/2) | 0.998 | 0.939 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293 | 2.0 M sodium formate and 0.1 Hepes buffer pH 7.5 |