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9HF9

Crystal structure of human TRF1 TRFH domain in complex with compound 5

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04-1
Synchrotron siteDiamond
BeamlineI04-1
Temperature [K]100
Detector technologyPIXEL
Collection date2022-01-20
DetectorDECTRIS EIGER2 XE 9M
Wavelength(s)0.9179
Spacegroup nameP 31 2 1
Unit cell lengths85.559, 85.559, 90.790
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution42.780 - 1.900
R-factor0.2138
Rwork0.213
R-free0.22790
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.008
RMSD bond angle0.760
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwareBUSTER (2.10.4 (26-JUL-2023))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]45.3901.940
High resolution limit [Å]1.9001.900
Rmerge0.0712.838
Rmeas0.0753.018
Rpim0.0241.020
Total number of observations30157916710
Number of reflections307741931
<I/σ(I)>12.80.6
Completeness [%]100.0
Redundancy9.88.7
CC(1/2)0.9990.785
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6291150 nanoliter of TRF1 TRFH at 28.6 mg/mL plus 150 nanoliter of a crystallisation solution consisting of 0.1 M MES pH 6, 1-12 mM Mg(OAc)2, 1% PEG8000, and 10-15% glycerol, against 35 microliter of crystallisation solution.

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PDB entries from 2026-01-14

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