9HDT
Variant T321N of Orotidine 5'-monophosphate decarboxylase-domain of human UMPS in complex with Deoxyuridine-5'-monophosphate (Deoxy UMP) at 1.3 Angstroms resolution
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PETRA III, EMBL c/o DESY BEAMLINE P14 (MX2) |
| Synchrotron site | PETRA III, EMBL c/o DESY |
| Beamline | P14 (MX2) |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2022-11-10 |
| Detector | DECTRIS EIGER2 X CdTe 16M |
| Wavelength(s) | 0.6888 |
| Spacegroup name | C 2 2 21 |
| Unit cell lengths | 78.090, 116.310, 62.180 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 32.420 - 1.300 |
| R-factor | 0.1272 |
| Rwork | 0.126 |
| R-free | 0.15130 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.009 |
| RMSD bond angle | 1.156 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | MOLREP |
| Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 32.420 | 1.347 |
| High resolution limit [Å] | 1.300 | 1.300 |
| Rmeas | 0.097 | |
| Number of reflections | 69652 | 6885 |
| <I/σ(I)> | 12.28 | |
| Completeness [%] | 99.8 | |
| Redundancy | 6.8 | |
| CC(1/2) | 0.999 | 0.717 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 293.15 | 100 mM Tris/HCl pH 7.0, 1.7 - 1.9 M Ammonium sulfate, 10 mM Glutathion pH 8.0, 5% (w/v) Glycerol |






