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9HD1

Crystal structure of human TRF1 TRFH domain in complex with compound 59

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04-1
Synchrotron siteDiamond
BeamlineI04-1
Temperature [K]100
Detector technologyPIXEL
Collection date2023-07-06
DetectorDECTRIS EIGER2 XE 9M
Wavelength(s)0.9212
Spacegroup nameP 41 21 2
Unit cell lengths51.646, 51.646, 147.175
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.730 - 1.730
R-factor0.1954
Rwork0.194
R-free0.22660
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.009
RMSD bond angle0.800
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwareBUSTER (2.10.4 (23-JAN-2024))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]51.6501.760
High resolution limit [Å]1.7301.730
Rmerge0.1092.729
Rmeas0.1132.897
Rpim0.0310.953
Total number of observations28861611252
Number of reflections217631144
<I/σ(I)>13.91.4
Completeness [%]100.0
Redundancy13.39.8
CC(1/2)0.9980.491
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6291150 nanoliter of TRF1 TRFH at 28.6 mg/mL plus 150 nanoliter of a crystallisation solution consisting of 0.1 M MES pH 6, 50 mM CaCl2 and 35-45 % PEG 200, against 35 microliter of crystallisation solution.

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PDB entries from 2026-01-14

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