9HD1
Crystal structure of human TRF1 TRFH domain in complex with compound 59
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I04-1 |
| Synchrotron site | Diamond |
| Beamline | I04-1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2023-07-06 |
| Detector | DECTRIS EIGER2 XE 9M |
| Wavelength(s) | 0.9212 |
| Spacegroup name | P 41 21 2 |
| Unit cell lengths | 51.646, 51.646, 147.175 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 48.730 - 1.730 |
| R-factor | 0.1954 |
| Rwork | 0.194 |
| R-free | 0.22660 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.009 |
| RMSD bond angle | 0.800 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | BUSTER (2.10.4 (23-JAN-2024)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 51.650 | 1.760 |
| High resolution limit [Å] | 1.730 | 1.730 |
| Rmerge | 0.109 | 2.729 |
| Rmeas | 0.113 | 2.897 |
| Rpim | 0.031 | 0.953 |
| Total number of observations | 288616 | 11252 |
| Number of reflections | 21763 | 1144 |
| <I/σ(I)> | 13.9 | 1.4 |
| Completeness [%] | 100.0 | |
| Redundancy | 13.3 | 9.8 |
| CC(1/2) | 0.998 | 0.491 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6 | 291 | 150 nanoliter of TRF1 TRFH at 28.6 mg/mL plus 150 nanoliter of a crystallisation solution consisting of 0.1 M MES pH 6, 50 mM CaCl2 and 35-45 % PEG 200, against 35 microliter of crystallisation solution. |






