Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9H4R

Structure of fertilization-blocking monoclonal antibody IE-3 VHVL bound to the ZP-N1 domain of mouse ZP2 (crystal form I)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID29
Synchrotron siteESRF
BeamlineID29
Temperature [K]100
Detector technologyPIXEL
Collection date2014-09-10
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.976251
Spacegroup nameP 21 21 21
Unit cell lengths91.640, 92.290, 91.170
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution29.160 - 1.530
R-factor0.2095
Rwork0.206
R-free0.23290
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)P43-Q138 of PDB ID 5II6; chain H of PDB ID 4AMK; chain L of PDB ID 3MBX
RMSD bond length0.003
RMSD bond angle0.576
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (1.21.2_5419+SVN)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]29.1641.580
High resolution limit [Å]1.5301.530
Rmeas0.0301.376
Rpim0.0160.721
Number of reflections11513011474
<I/σ(I)>18.61
Completeness [%]98.599.2
Redundancy3.33.4
CC(1/2)1.0000.550
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.529324% (v/v) PEG 3350, 0.2 M sodium tartrate, 0.1 M Na-HEPES pH 6.5

236620

PDB entries from 2025-05-28

PDB statisticsPDBj update infoContact PDBjnumon