9H3B
Lotus japonicus CERK6 extracellular domain in complex with chitopentaose
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX IV BEAMLINE BioMAX |
Synchrotron site | MAX IV |
Beamline | BioMAX |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-02-17 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97 |
Spacegroup name | P 61 2 2 |
Unit cell lengths | 60.137, 60.137, 390.422 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 19.680 - 2.580 |
R-factor | 0.2514 |
Rwork | 0.250 |
R-free | 0.26940 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.004 |
RMSD bond angle | 0.952 |
Data reduction software | XDS |
Data scaling software | STARANISO |
Phasing software | PHASER |
Refinement software | PHENIX (1.21.1_5286) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 19.680 | 2.914 |
High resolution limit [Å] | 2.580 | 2.580 |
Rmerge | 0.129 | 6.308 |
Rmeas | 0.132 | 6.450 |
Rpim | 0.029 | 1.317 |
Number of reflections | 5787 | 289 |
<I/σ(I)> | 13.4 | |
Completeness [%] | 40.6 | |
Redundancy | 22 | |
CC(1/2) | 0.999 | 0.434 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 292.15 | 0.2M Potassium sodium tartrate tetrahydrate 0.1M Bis-Tris propane pH 6.5 18% PEG-3350 |