Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9H3B

Lotus japonicus CERK6 extracellular domain in complex with chitopentaose

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsMAX IV BEAMLINE BioMAX
Synchrotron siteMAX IV
BeamlineBioMAX
Temperature [K]100
Detector technologyPIXEL
Collection date2023-02-17
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.97
Spacegroup nameP 61 2 2
Unit cell lengths60.137, 60.137, 390.422
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution19.680 - 2.580
R-factor0.2514
Rwork0.250
R-free0.26940
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.004
RMSD bond angle0.952
Data reduction softwareXDS
Data scaling softwareSTARANISO
Phasing softwarePHASER
Refinement softwarePHENIX (1.21.1_5286)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]19.6802.914
High resolution limit [Å]2.5802.580
Rmerge0.1296.308
Rmeas0.1326.450
Rpim0.0291.317
Number of reflections5787289
<I/σ(I)>13.4
Completeness [%]40.6
Redundancy22
CC(1/2)0.9990.434
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.5292.150.2M Potassium sodium tartrate tetrahydrate 0.1M Bis-Tris propane pH 6.5 18% PEG-3350

238895

PDB entries from 2025-07-16

PDB statisticsPDBj update infoContact PDBjnumon