9H3A
Crystal structure of Lotus japonicus CHIP13 extracellular domain in complex with chitooctaose
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P14 (MX2) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P14 (MX2) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-06-17 |
Detector | DECTRIS EIGER2 X CdTe 16M |
Wavelength(s) | 0.97 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 80.750, 45.550, 75.560 |
Unit cell angles | 90.00, 102.26, 90.00 |
Refinement procedure
Resolution | 39.450 - 1.350 |
R-factor | 0.1546 |
Rwork | 0.153 |
R-free | 0.19130 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.016 |
RMSD bond angle | 1.565 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.21.2_5419) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.450 | 1.390 |
High resolution limit [Å] | 1.350 | 1.350 |
Rmeas | 0.062 | 8.770 |
Number of reflections | 110107 | 4354 |
<I/σ(I)> | 15.04 | 0.32 |
Completeness [%] | 95.2 | |
Redundancy | 3.6 | |
CC(1/2) | 0.998 | 0.510 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 292.15 | 0.2M Ammonium chloride 20% w/vPEG 3350 1 mM octa-N-acetyl-chitooctaose |