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9H2Y

Crystal structure of YTHDC1 in complex with AI_056

This is a non-PDB format compatible entry.
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X06DA
Synchrotron siteSLS
BeamlineX06DA
Temperature [K]100
Detector technologyPIXEL
Collection date2023-02-25
DetectorDECTRIS PILATUS 2M-F
Wavelength(s)1
Spacegroup nameP 1 21 1
Unit cell lengths39.850, 104.010, 41.990
Unit cell angles90.00, 104.45, 90.00
Refinement procedure
Resolution38.590 - 1.240
R-factor0.2169
Rwork0.216
R-free0.24290
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.005
RMSD bond angle0.770
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (1.21.1_5286)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]38.6001.310
High resolution limit [Å]1.2401.240
Number of reflections9346815050
<I/σ(I)>14.55
Completeness [%]99.2
Redundancy3.35
CC(1/2)0.9970.661
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP29525% PEG 3350, 0.2M Ammonium Sulphate, 0.1M Bis-Tris pH 6.5

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