9H0Q
N terminal domain of BC2L-C lectin in complex with N-(beta-L-Fucopyranosyl)-biphenyl-3-carboxamide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 2 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2024-07-05 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97856 |
Spacegroup name | H 3 2 |
Unit cell lengths | 169.506, 169.506, 344.036 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 48.932 - 2.550 |
Rwork | 0.179 |
R-free | 0.22190 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.014 |
RMSD bond angle | 1.889 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.15) |
Phasing software | PHASER (2.8.3) |
Refinement software | REFMAC (5.8.0425) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.932 | 2.620 |
High resolution limit [Å] | 2.550 | 2.550 |
Rmerge | 0.091 | 0.916 |
Rmeas | 0.100 | 1.000 |
Rpim | 0.041 | 0.403 |
Number of reflections | 62109 | 4529 |
<I/σ(I)> | 18.6 | 2.7 |
Completeness [%] | 100.0 | |
Redundancy | 11.6 | |
CC(1/2) | 0.999 | 0.831 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 292 | 17% Peg10K, 100 mM sodium acetate and 100 mM Bis-Tris pH 5.5 cryo in 7.6% Peg10K, 22.5% Peg Smear Low, 45 mM sodium acetate and Bis Tris pH 5.5 and 3 mM PMA127 |