9GUJ
Crystal structure of transcription factor NtcA from Synechococcus elongatus in complex with its transcriptional co- activator PipX and its target DNA (Crystal II)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-09-12 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9772 |
Spacegroup name | I 4 |
Unit cell lengths | 165.710, 165.710, 177.550 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 82.860 - 4.300 |
R-factor | 0.28528 |
Rwork | 0.284 |
R-free | 0.31614 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 1.614 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0352) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 82.900 | 4.530 |
High resolution limit [Å] | 4.300 | 4.300 |
Number of reflections | 16116 | 16116 |
<I/σ(I)> | 4.8 | |
Completeness [%] | 98.5 | |
Redundancy | 3.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 294.15 | PipX-NtcA-DNA complex was in 50 mM sodium citrate pH 6.5, 0.5 M NaCl, 5 mM magnesium cloride, 50 mM arginine hydrocloride, 50 mM Na L-glutamate and 10mM 2-oxoglutarate. CRYSTALLIZATION SOLUTION: 0,1M Tris-HCL pH 8,5, 2M ammonium phosphate and 0,1M ZnCl2. Cryo protectant: 4M KCL |