9GPE
ManDH5 E303Q in complex with mannotetraose after co-crystalliztion with mannotetraose at 1.6 angstroms resolution a beta-D-Mannanase of GH5 family from Dictyoglomus thermophilium
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
| Synchrotron site | PETRA III, EMBL c/o DESY |
| Beamline | P13 (MX1) |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2019-09-30 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.976 |
| Spacegroup name | I 2 2 2 |
| Unit cell lengths | 94.946, 99.337, 153.553 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 83.400 - 1.620 |
| R-factor | 0.165 |
| Rwork | 0.164 |
| R-free | 0.17880 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | Native ManDH5 |
| RMSD bond length | 0.006 |
| RMSD bond angle | 0.903 |
| Data reduction software | XDS |
| Data scaling software | xia2 (CCP4 7.8.078) |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.14_3228) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 83.400 | 1.650 |
| High resolution limit [Å] | 1.620 | 1.620 |
| Number of reflections | 92151 | 4530 |
| <I/σ(I)> | 19.1 | 3.3 |
| Completeness [%] | 100.0 | 100 |
| Redundancy | 10.4 | 11 |
| CC(1/2) | 0.999 | 0.904 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7 | 294 | 0.1 M MMT buffer pH 7.0, 27% PEG 1500, 0.01% Na-azide |






