9GPD
ManDH5 E303Q mutant in complex with mannotriose a beta-D-Mannanase of GH5 family from Dictyoglomus thermophilium
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
| Synchrotron site | PETRA III, EMBL c/o DESY |
| Beamline | P13 (MX1) |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2019-09-30 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.979 |
| Spacegroup name | I 2 2 2 |
| Unit cell lengths | 95.785, 99.114, 153.841 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 83.300 - 1.350 |
| R-factor | 0.1564 |
| Rwork | 0.156 |
| R-free | 0.16740 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | Native ManDH5 |
| RMSD bond length | 0.009 |
| RMSD bond angle | 1.125 |
| Data reduction software | XDS |
| Data scaling software | xia2 (CCP4i2 7.0.078) |
| Phasing software | PHASER (1.14_3228) |
| Refinement software | PHENIX (1.14_3228) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 83.300 | 1.370 |
| High resolution limit [Å] | 1.350 | 1.350 |
| Number of reflections | 159142 | 7778 |
| <I/σ(I)> | 22.1 | 3.4 |
| Completeness [%] | 99.7 | 99 |
| Redundancy | 13.3 | 13.6 |
| CC(1/2) | 1.000 | 0.894 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 294 | 0.1M MMT buffer pH 7.0, 27% PEG 1500, 0.01% Na-azide Protein solution (in tris) was mixed with mannotetraose solution (in tris), final conentrations: 0.22mM protein, 15mM M3 |






