9GNM
X-ray crystal structure of VvPYL1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALBA BEAMLINE XALOC |
Synchrotron site | ALBA |
Beamline | XALOC |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-11-24 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97912 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 54.028, 69.417, 107.698 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.640 - 2.100 |
R-factor | 0.234 |
Rwork | 0.232 |
R-free | 0.26950 |
Structure solution method | MOLECULAR REPLACEMENT |
Data reduction software | XDS |
Data scaling software | XDS |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 42.640 | 2.180 |
High resolution limit [Å] | 2.100 | 2.100 |
Number of reflections | 24246 | 2375 |
<I/σ(I)> | 47.34 | 1.33 |
Completeness [%] | 99.6 | 98.8 |
Redundancy | 1.34 | |
CC(1/2) | 0.946 | 0.825 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5 | 291 | 0.1 M sodium acetate, pH 5.0, 0.2 M magnesium chloride, 20% PEG 6000 |