9GN6
Crystal Structure of Deacetylase (HdaH) from Klebsiella pneumoniae subsp. ozaenae in complex with the inhibitor SAHA
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
| Synchrotron site | PETRA III, EMBL c/o DESY |
| Beamline | P13 (MX1) |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2019-10-06 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 1.000000 |
| Spacegroup name | I 2 3 |
| Unit cell lengths | 146.206, 146.206, 146.206 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 46.277 - 1.950 |
| Rwork | 0.137 |
| R-free | 0.17560 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.012 |
| RMSD bond angle | 1.962 |
| Data reduction software | XDS (Mar 15, 2019 BUILT=20190315) |
| Data scaling software | XDS (Mar 15, 2019 BUILT=20190315) |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.8.0425) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 46.300 | 2.000 |
| High resolution limit [Å] | 1.950 | 1.950 |
| Rmerge | 0.020 | |
| Rmeas | 0.028 | 0.844 |
| Rpim | 0.020 | 0.597 |
| Number of reflections | 37885 | 2642 |
| <I/σ(I)> | 16.3 | 1.3 |
| Completeness [%] | 100.0 | 100 |
| Redundancy | 1.9 | 2 |
| CC(1/2) | 1.000 | 0.532 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 8 | 293 | 2% (w/v) PEG 8000, 10% (v/v) glycerol and 0.5M KCl |






