9GLB
Crystal Structure of Deacetylase (HdaH) from Klebsiella pneumoniae subsp. ozaenae
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.2 |
Synchrotron site | BESSY |
Beamline | 14.2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-03-15 |
Detector | DECTRIS PILATUS3 S 2M |
Wavelength(s) | 0.918400 |
Spacegroup name | I 2 3 |
Unit cell lengths | 147.163, 147.163, 147.163 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 26.010 - 2.100 |
R-factor | 0.1525 |
Rwork | 0.151 |
R-free | 0.18060 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 0.832 |
Data reduction software | XDS (Jan 26, 2018 BUILT=20180808) |
Data scaling software | XDS (Jan 26, 2018 BUILT=20180808) |
Phasing software | PHASER (2.8.3) |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.540 | 2.160 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmerge | 0.145 | 2.755 |
Rmeas | 0.148 | 2.824 |
Rpim | 0.033 | 0.622 |
Number of reflections | 31019 | 2547 |
<I/σ(I)> | 13.4 | 1.4 |
Completeness [%] | 100.0 | 100 |
Redundancy | 19.9 | 20.5 |
CC(1/2) | 0.999 | 0.549 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 293 | 12% (w/v) PEG 8000, 10% (v/v) glycerol and 0.5M KCl |