9GKT
Crystal structure of artificial enzyme LmrR_pAF variant RGN
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE MASSIF-1 |
Synchrotron site | ESRF |
Beamline | MASSIF-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-10-03 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.96546 |
Spacegroup name | P 21 2 21 |
Unit cell lengths | 38.530, 49.956, 125.731 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.430 - 2.450 |
R-factor | 0.2184 |
Rwork | 0.215 |
R-free | 0.28580 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 0.987 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 125.730 | 2.550 |
High resolution limit [Å] | 2.450 | 2.450 |
Rmerge | 0.121 | 1.005 |
Rmeas | 0.137 | 1.139 |
Rpim | 0.063 | 0.525 |
Total number of observations | 40148 | 4383 |
Number of reflections | 9401 | 1029 |
<I/σ(I)> | 8.9 | 1.5 |
Completeness [%] | 99.2 | |
Redundancy | 4.3 | 4.3 |
CC(1/2) | 0.997 | 0.531 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | protein solution: 7-8 mg/ml in 20 mM Tris-HCl, pH 8.0, 280 mM NaCl and 1 mM EDTA, crystallization solution: 25% PEG 1500 in 0.1 M sodium propionate, sodium cacodylate trihydrate, Bis-Tris propane (PCTP) buffer, pH 7-8 |