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9GK1

SSX structure of human cytochrome P450 3A4 at room temperature

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsMAX IV BEAMLINE BioMAX
Synchrotron siteMAX IV
BeamlineBioMAX
Temperature [K]293
Detector technologyPIXEL
Collection date2022-12-09
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.976
Spacegroup nameI 2 2 2
Unit cell lengths79.950, 103.740, 128.640
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution80.750 - 2.950
R-factor0.24643
Rwork0.244
R-free0.29508
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.002
RMSD bond angle1.208
Data reduction softwareCrystFEL (0.10.1-6)
Data scaling softwareCrystFEL (0.10.1-6)
Phasing softwarePHASER (2.8.3)
Refinement softwareREFMAC (5.8.0267)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]80.7503.000
High resolution limit [Å]2.9502.950
Number of reflections11603547
<I/σ(I)>14.7587521
Completeness [%]100.0100
Redundancy416.91282.9
CC(1/2)0.9950.545
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.3293.15Final droplet contained 6%v/v PEG3350, 50 mM sodium malonate, 15 mg/mL CYP3A4, 25 mM KPi pH 7.3, 100 mM KCl, 1 mM DTT, 0.5 mM EDTA, 10%v/v glycerol, 1%v/v DMSO and 100 uM beta-napthoflavone. The droplet was equillibrated against a reservoir of 100 mM sodium malonate and 12%v/v PEG3350. The crystalisation droplet swelled due to high glycerol concentration.

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