9GIH
Structure of the mouse 8-oxoguanine DNA Glycosylase mOGG1 in complex with ligand TH14047
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2024-03-14 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.976 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 79.976, 80.764, 166.815 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 83.407 - 2.271 |
Rwork | 0.208 |
R-free | 0.26660 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 1.638 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0425) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 83.407 | 2.310 |
High resolution limit [Å] | 2.270 | 2.270 |
Number of reflections | 49693 | 2504 |
<I/σ(I)> | 14.1 | |
Completeness [%] | 98.1 | |
Redundancy | 13.3 | |
CC(1/2) | 0.989 | 0.759 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.09M Halogens, 0.1M MOPS/HEPES-Na pH 7.5, 50% v/v EDO_P8K (Morpheus Screen, Molecular Dimensions). |