Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

9GDK

Jumonji domain-containing protein 1C with crystallization epitope mutations L2440Y:G2444H

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04-1
Synchrotron siteDiamond
BeamlineI04-1
Temperature [K]100
Detector technologyPIXEL
Collection date2015-03-08
DetectorDECTRIS PILATUS 2M
Wavelength(s)0.98
Spacegroup nameP 1 21 1
Unit cell lengths45.200, 98.250, 87.400
Unit cell angles90.00, 92.04, 90.00
Refinement procedure
Resolution31.369 - 1.780
Rwork0.209
R-free0.24220
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.008
RMSD bond angle1.859
Data reduction softwarexia2
Data scaling softwarexia2
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0430 (refmacat 0.4.77))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]31.3701.830
High resolution limit [Å]1.7801.780
Rmerge0.0860.936
Number of reflections7157718899
<I/σ(I)>121.7
Completeness [%]98.199.4
Redundancy3.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.5298LFS well F04 20% PEG3350 10% ethylene glycol 0.1M bis-tris-propane pH 6.5 0.2M potassium thiocyanate

224004

PDB entries from 2024-08-21

PDB statisticsPDBj update infoContact PDBjnumon