9G3Q
Chitinase-like protein AgBR1 from Aedes aegypti
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-03-06 |
Detector | DECTRIS EIGER2 X 16M |
Wavelength(s) | 0.9795 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 50.432, 77.191, 51.116 |
Unit cell angles | 90.00, 104.84, 90.00 |
Refinement procedure
Resolution | 49.410 - 1.200 |
R-factor | 0.1493 |
Rwork | 0.148 |
R-free | 0.17960 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.010 |
RMSD bond angle | 1.039 |
Data reduction software | autoPROC |
Data scaling software | autoPROC |
Phasing software | PHENIX |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.410 | 1.328 |
High resolution limit [Å] | 1.200 | 1.204 |
Rmerge | 0.044 | 0.744 |
Rmeas | 0.048 | 0.829 |
Rpim | 0.018 | 0.355 |
Number of reflections | 81290 | 4065 |
<I/σ(I)> | 15.9 | 1.525 |
Completeness [%] | 93.5 | 51.34 |
Redundancy | 6.68 | 4.98 |
CC(1/2) | 0.999 | 0.731 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4 | 291.15 | Thawed AgBR1 protein was desalted with 150 mM NaCl, 50 mM Tris, pH 7.4 buffer using Micro Bio-Spin columns (Biorad) to eliminate glycerol. The measured nanodrop absorbance was 8.7 mg/mL. 75 nL of protein were mixed with 150 nL of crystallization reservoir buffer contaning 0.1 M MMT, 25% PEG 1,500 from PACT Premier. |