9FZF
Transcriptional repressor NrdR from E. coli, ADP/dATP bound state
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-01-19 |
Detector | DECTRIS EIGER2 X 16M |
Wavelength(s) | 0.9795 |
Spacegroup name | P 62 2 2 |
Unit cell lengths | 147.126, 147.126, 85.805 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 127.420 - 2.444 |
R-factor | 0.2181 |
Rwork | 0.215 |
R-free | 0.28310 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 0.850 |
Data reduction software | autoPROC (15-Mar-2019) |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | BUSTER (2.11.8) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 127.420 | 2.699 |
High resolution limit [Å] | 2.444 | 2.444 |
Rmerge | 0.310 | 2.635 |
Rmeas | 0.315 | 2.667 |
Rpim | 0.050 | 0.413 |
Number of reflections | 10132 | 517 |
<I/σ(I)> | 10.6 | 1.6 |
Completeness [%] | 95.1 | 84.7 |
Redundancy | 39.1 | 41.2 |
CC(1/2) | 0.999 | 0.912 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 293 | 0.1 M Bis-Tris pH 5.5, 0.2 M ammonium acetate, 45% (v/v) MPD |