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9FYM

Lacto-N-biosidase from Treponema denticola ATCC 35405

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID30B
Synchrotron siteESRF
BeamlineID30B
Temperature [K]100
Detector technologyPIXEL
Collection date2023-02-01
DetectorDECTRIS PILATUS 6M
Wavelength(s)1.03320
Spacegroup nameP 21 21 21
Unit cell lengths43.954, 50.701, 153.656
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.150 - 1.340
R-factor0.1702
Rwork0.169
R-free0.19670
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.014
RMSD bond angle1.270
Data reduction softwareautoPROC
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.1501.390
High resolution limit [Å]1.3401.340
Rmerge0.0831.000
Rmeas0.0891.000
Rpim0.0311.000
Number of reflections775567469
<I/σ(I)>11.310.83
Completeness [%]99.697.97
Redundancy8.27.1
CC(1/2)0.9980.464
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.5294.1510% w/v PEG 8000, 9% ethylene glycol, 0.1M HEPES pH 7.5

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